{ "_id": "6a1559fdacfb0bcc41d5eeb7", "Package": "phenoCDM", "Title": "Continuous Development Models for Incremental Time-Series\nAnalysis", "Version": "0.1.3", "Date": "2018-05-01", "Author": "Bijan Seyednasrollah, Jennifer J. Swenson, Jean-Christophe\nDomec, James S. Clark", "Maintainer": "Bijan Seyednasrollah ", "Description": "Using the Bayesian state-space approach, we developed a\ncontinuous development model to quantify dynamic incremental\nchanges in the response variable. While the model was\noriginally developed for daily changes in forest green-up, the\nmodel can be used to predict any similar process. The CDM can\ncapture both timing and rate of nonlinear processes. Unlike\nstatics methods, which aggregate variations into a single\nmetric, our dynamic model tracks the changing impacts over\ntime. The CDM accommodates nonlinear responses to variation in\npredictors, which changes throughout development.", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "RoxygenNote": "6.0.1.9000", "BugReports": "https://github.com/bnasr/phenoCDM/issues", "VignetteBuilder": "knitr", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-26 08:25:53 UTC", "User": "root" }, "Config/pak/sysreqs": "jags", "Repository": "https://bbcrown.r-universe.dev", "Date/Publication": "2018-05-02 02:45:15 UTC", "RemoteUrl": "https://github.com/cran/phenoCDM", "RemoteRef": "HEAD", "RemoteSha": "bb6ad3eba4afd33623b2091f3d256bdc98784ebf", "MD5sum": "a6f6f19d9e732638f2d254a2607dfb06", "_user": "bbcrown", "_type": "src", "_file": "phenoCDM_0.1.3.tar.gz", "_fileid": "64534133de919572ae08d7698c2948dde0c4bc71cba8bd5dd8d805fc1c5db71a", "_filesize": 279344, "_sha256": "64534133de919572ae08d7698c2948dde0c4bc71cba8bd5dd8d805fc1c5db71a", "_created": "2026-05-26T08:25:53.000Z", "_published": "2026-05-26T08:29:48.994Z", "_distro": "noble", "_jobs": [ { "job": 77835687210, "time": 122, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7212306417" }, { "job": 77835687301, "time": 200, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7212331012" }, { "job": 77835687207, "time": 115, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7212303988" }, { "job": 77835687165, "time": 80, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7212292668" }, { "job": 77835307675, "time": 147, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7212266082" }, { "job": 77835687209, "time": 106, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7212301361" }, { "job": 77835687233, "time": 79, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7212292806" }, { "job": 77835687166, "time": 111, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7212302553" }, { "job": 77835687183, "time": 115, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7212304174" } ], "_buildurl": "https://github.com/r-universe/bbcrown/actions/runs/26441034532", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/cran/phenoCDM", "_commit": { "id": "bb6ad3eba4afd33623b2091f3d256bdc98784ebf", "author": "Bijan Seyednasrollah ", "committer": "cran-robot ", "message": "version 0.1.3\n", "time": 1525229115 }, "_maintainer": { "name": "Bijan Seyednasrollah", "email": "bijan.s.nasr@gmail.com", "login": "bbcrown", "description": "ML Engineer", "uuid": 13002267 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.3.0", "role": "Depends" }, { "package": "rjags", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" } ], "_owner": "cran", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 1, "_contributors": [ { "user": "bbcrown", "count": 3, "uuid": 13002267 } ], "_userbio": { "uuid": 13002267, "type": "user", "name": "BC", "description": "ML Engineer" }, "_downloads": { "count": 173, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/phenoCDM" }, "_devurl": "https://github.com/bnasr/phenocdm", "_searchresults": 8, "_topics": [ "jags", "cpp" ], "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/phenoCDM.html", "manual.pdf" ], "_realowner": "bbcrown", "_cranurl": false, "_releases": [ { "version": "0.0.2", "date": "2018-02-16" }, { "version": "0.1.2", "date": "2018-03-20" }, { "version": "0.1.3", "date": "2018-05-02" } ], "_exports": [ "fitCDM", "getGibbsSummary", "phenoSim", "phenoSimPlot", "plotPOGibbs", "plotPost" ], "_help": [ { "page": "fitCDM", "title": "Fit a CDM Model", "topics": [ "fitCDM" ] }, { "page": "getGibbsSummary", "title": "Summarize Output of the CDM Model", "topics": [ "getGibbsSummary" ] }, { "page": "phenoSim", "title": "Simulate Green-up Phenology Data", "topics": [ "phenoSim" ] }, { "page": "phenoSimPlot", "title": "Plot Simulated Phenology Data", "topics": [ "phenoSimPlot" ] }, { "page": "plotPOGibbs", "title": "Plot Observed vs Predicted", "topics": [ "plotPOGibbs" ] }, { "page": "plotPost", "title": "Plot Posterior Distributions", "topics": [ "plotPost" ] } ], "_rundeps": [ "coda", "lattice", "rjags" ], "_sysdeps": [ { "shlib": "libjags", "package": "jags", "headers": "jags", "source": "jags", "version": "4.3.2-2.2404.0", "name": "jags", "homepage": "https://mcmc-jags.sourceforge.io", "description": "Just Another Gibbs Sampler for Bayesian MCMC - binary\nJAGS is Just Another Gibbs Sampler. It is a program for analysis of\nBayesian hierarchical models using Markov Chain Monte Carlo (MCMC)\nsimulation not wholly unlike BUGS.\n\nJAGS was written with three aims in mind:\n* To have an engine for the BUGS language that runs on Unix\n* To be extensible, allowing users to write their own functions,\ndistributions and samplers.\n* To be a plaftorm for experimentation with ideas in Bayesian modelling\n\nThis package contains the 'jags' binary as well as the associated\nshared library modules loaded by the binary." }, { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "14.2.0-4ubuntu2~24.04.1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" } ], "_vignettes": [ { "source": "getting-started.Rmd", "filename": "getting-started.html", "title": "Getting started with phenoCDM", "author": "Bijan Seyednasrollah", "engine": "knitr::rmarkdown", "headings": [ "Getting started with phenoCDM", "Installation", "Loading the package", "Example", "Simulating a dataset of three time-series:", "Plotting the simulated time-series:", "Fitting the CDM model on the simulated data:", "Obtaining the summarized output:", "Comparing the model fitted parameters against true values:", "Comparing the model predictions of the response vector against the observations:", "Documentations" ], "created": "2018-05-02 02:45:15", "modified": "2018-05-02 02:45:15", "commits": 1 } ], "_score": 2, "_indexed": true, "_nocasepkg": "phenocdm", "_universes": [ "bbcrown", "bnasr" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.3", "date": "2026-05-26T08:27:58.000Z", "distro": "noble", "commit": "bb6ad3eba4afd33623b2091f3d256bdc98784ebf", "fileid": "ec8b0055d2fa7b3729b272b981a7c1ead6ff139e8bb1e4029fc0e6f3e414527e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bbcrown/actions/runs/26441034532" }, { "r": "4.6.0", "os": "linux", "version": "0.1.3", "date": "2026-05-26T08:29:16.000Z", "distro": "noble", "commit": "bb6ad3eba4afd33623b2091f3d256bdc98784ebf", "fileid": "8093bacd87b785f8d43a2b67b62bd82fcbd5af65043afc67bc328517fc7d8df5", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bbcrown/actions/runs/26441034532" }, { "r": "4.5.3", "os": "mac", "version": "0.1.3", "date": "2026-05-26T08:27:52.000Z", "commit": "bb6ad3eba4afd33623b2091f3d256bdc98784ebf", "fileid": "b7d1ede18d408a4ff4b68eed68b3284d17e59ffdb2e754ba2df9eeb2fbe766d1", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bbcrown/actions/runs/26441034532" }, { "r": "4.6.0", "os": "mac", "version": "0.1.3", "date": "2026-05-26T08:27:21.000Z", "commit": "bb6ad3eba4afd33623b2091f3d256bdc98784ebf", "fileid": "b41731fbe1bcf594079acdb972ed4683f87f7878f6df169b30f7aabd3fea8ad9", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bbcrown/actions/runs/26441034532" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.3", "date": "2026-05-26T08:27:59.000Z", "commit": "bb6ad3eba4afd33623b2091f3d256bdc98784ebf", "fileid": "e7a159a2a339d26080230d106f46997d26358025c2a538c140f2f357d6eefb46", "status": "success", "buildurl": "https://github.com/r-universe/bbcrown/actions/runs/26441034532" }, { "r": "4.7.0", "os": "win", "version": "0.1.3", "date": "2026-05-26T08:27:10.000Z", "commit": "bb6ad3eba4afd33623b2091f3d256bdc98784ebf", "fileid": "d509a809035fd5aea734bde9126d19df61cb5ebebd7880119020514795f4f1da", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bbcrown/actions/runs/26441034532" }, { "r": "4.5.3", "os": "win", "version": "0.1.3", "date": "2026-05-26T08:27:38.000Z", "commit": "bb6ad3eba4afd33623b2091f3d256bdc98784ebf", "fileid": "acd8e50bbf013f7f333ed60bf26db6cfe77078959c568997c513178d090f0044", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bbcrown/actions/runs/26441034532" }, { "r": "4.6.0", "os": "win", "version": "0.1.3", "date": "2026-05-26T08:27:45.000Z", "commit": "bb6ad3eba4afd33623b2091f3d256bdc98784ebf", "fileid": "0b04ce438d90dd215b50720d572821ff8bb295fa4a28e8cbac29c74a1e65334e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bbcrown/actions/runs/26441034532" } ] }